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Cofit
Protein
Homologs
Top cofit genes for ECD_03659 from
Escherichia coli BL21
thioredoxin 1
SEED: Thioredoxin
KEGG: thioredoxin 1
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ECD
_02114
putative ATP-dependent DNA or RNA helicase
no
0.45
2
ECD
_01176
dhaKLM operon transcription activator
no
0.38
3
ECD
_04088
DUF1107 family protein
no
0.37
4
ECD
_02322
sulfate/thiosulfate transporter subunit
0.54
0.37
5
ECD
_02423
isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor
0.79
0.36
6
ECD
_01374
cytochrome b561
no
0.36
7
ECD
_03289
d-gluconate inducible gluconate regulon transcriptional repressor
no
0.36
8
ECD
_04252
uncharacterized protein
no
0.35
9
ECD
_02592
activator of AmiC murein hydrolase activity, lipoprotein
0.66
0.35
10
ECD
_00771
Fe(II)-dependent oxygenase superfamily protein
no
0.34
11
ECD
_00342
nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function
0.51
0.34
12
ECD
_03794
superoxide dismutase, Mn
0.56
0.34
13
ECD
_00061
RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase
0.55
0.34
14
ECD
_00392
HU, DNA-binding transcriptional regulator, beta subunit
0.49
0.33
15
ECD
_02335
N-acetylmuramoyl-l-alanine amidase I
no
0.33
16
ECD
_02659
glycine cleavage system transcriptional activator; autorepressor
0.60
0.33
17
ECD
_00006
peroxide resistance protein, lowers intracellular iron
0.73
0.32
18
ECD
_02116
spermidine nucleoid-associated protein
0.63
0.32
19
ECD
_03557
multidrug efflux system protein
no
0.32
20
ECD
_01982
putative citrate/iron-citrate/zinc-citrate efflux transporter
no
0.32
Or look for
negative cofitness