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  • Top cofit genes for ECD_03417 from Escherichia coli BL21

    D-xylose isomerase
    SEED: Xylose isomerase (EC 5.3.1.5)
    KEGG: xylose isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 ECD_00450 conserved protein, rhs-like protein no 0.37
    2 ECD_01910 UPF0265 family protein no 0.36
    3 ECD_00318 taurine dioxygenase, 2-oxoglutarate-dependent no 0.35
    4 ECD_03527 hypothetical protein no 0.35
    5 ECD_03413 O-acetyltransferase for enterobacterial common antigen (ECA) no 0.35
    6 ECD_00459 tartronate semialdehyde reductase, NADH-dependent no 0.34
    7 ECD_02471 putative DNA-binding transcriptional regulator no 0.33
    8 ECD_00219 L,D-transpeptidase-related protein no 0.33
    9 ECD_02981 pyruvate formate-lyase 4/2-ketobutyrate formate-lyase 0.29 0.33
    10 ECD_00497 DLP12 prophage; uncharacterized protein no 0.32
    11 ECD_03794 superoxide dismutase, Mn 0.17 0.32
    12 ECD_00920 DUF1006 family protein with C-terminal wHTH domain 0.52 0.31
    13 ECD_03628 asparagine synthetase A 0.35 0.31
    14 ECD_04057 acyl CoA esterase 0.35 0.31
    15 ECD_03627 transcriptional activator of asnA; autorepressor no 0.31
    16 ECD_02454 phosphatidylglycerophosphatase C, membrane bound no 0.30
    17 ECD_00660 conserved protein, rhs-like protein no 0.30
    18 ECD_03245 DNA catabolic protein 0.42 0.30
    19 ECD_03838 putative enzyme IIB component of PTS no 0.30
    20 ECD_03416 xylulokinase 0.97 0.30

    Or look for negative cofitness