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  • Top cofit genes for ECD_03013 from Escherichia coli BL21

    16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent
    SEED: rRNA small subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 ECD_03039 putative EptAB family phosphoethanolamine transferase, inner membrane protein 0.51 0.83
    2 ECD_00646 lipoprotein no 0.69
    3 ECD_00629 tRNA-i(6)A37 methylthiotransferase 0.76 0.67
    4 ECD_04103 putative antibiotic peptide MccB17 maturation peptidase 0.83 0.66
    5 ECD_03106 ribonuclease G 0.86 0.65
    6 ECD_02946 evolved beta-D-galactosidase, beta subunit; cupin superfamily no 0.65
    7 ECD_04047 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent 0.86 0.65
    8 ECD_03087 putative transporter no 0.64
    9 ECD_02102 putative NAD-dependent D-mannonate oxidoreductase no 0.62
    10 ECD_03275 rhomboid intramembrane serine protease 0.79 0.62
    11 ECD_02405 ancillary SecYEG translocon subunit; putative anti-RcsB factor 0.60 0.61
    12 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.74 0.61
    13 ECD_00337 AroM family protein no 0.61
    14 ECD_02909 DUF1190 family protein 0.31 0.60
    15 ECD_01044 OPG biosynthetic transmembrane succinyltransferase no 0.59
    16 ECD_02652 hypothetical protein no 0.59
    17 ECD_01110 transcription-repair coupling factor 0.64 0.58
    18 ECD_00929 murein L,D-transpeptidase no 0.58
    19 ECD_00404 acyl-CoA thioesterase 2 no 0.58
    20 ECD_02994 antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system 0.67 0.58

    Or look for negative cofitness