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Cofit
Protein
Homologs
Top cofit genes for ECD_00336 from
Escherichia coli BL21
OxyR-regulated conserved protein
SEED: Protein YaiA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ECD
_03681
adenylate cyclase
no
0.49
2
ECD
_04107
trehalose-6-P hydrolase
no
0.48
3
ECD
_03247
DNA catabolic putative pilus assembly protein
no
0.48
4
ECD
_04106
anaerobic ribonucleoside-triphosphate reductase
no
0.47
5
ECD
_03507
bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
no
0.46
6
ECD
_03363
transcriptional activator of gadA and gadBC; repressor of gadX
no
0.45
7
ECD
_03908
maltose outer membrane porin (maltoporin)
no
0.45
8
ECD
_02583
methyl-directed mismatch repair protein
no
0.45
9
ECD
_03270
mal regulon transcriptional activator
no
0.45
10
ECD
_03089
stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase-like protein
no
0.44
11
ECD
_03769
putative transcriptional regulator for sulfoquinovose utilization
no
0.44
12
ECD
_00232
aminoacyl-histidine dipeptidase (peptidase D)
0.26
0.44
13
ECD
_02864
glutathionylspermidine amidase and glutathionylspermidine synthetase
no
0.43
14
ECD
_02861
putative ATP-binding protein
0.75
0.43
15
ECD
_00014
chaperone Hsp70, with co-chaperone DnaJ
0.18
0.43
16
ECD
_03897
glucosephosphate isomerase
no
0.43
17
ECD
_00954
paraquat-inducible, SoxRS-regulated inner membrane protein
no
0.42
18
ECD
_00388
proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases
0.20
0.42
19
ECD
_03356
putative Mg(2+) transport ATPase, inner membrane protein
0.20
0.42
20
ECD
_04046
exoribonuclease R, RNase R
no
0.42
Or look for
negative cofitness