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  • Top cofit genes for DZA65_RS22690 from Dickeya dianthicola ME23

    IS3 family transposase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS11345 superoxide dismutase no 0.54
    2 DZA65_RS01185 PLP-dependent aminotransferase family protein no 0.50
    3 DZA65_RS18795 type VI secretion system tip protein VgrG no 0.49
    4 DZA65_RS18810 GPW/gp25 family protein no 0.48
    5 DZA65_RS00025 MFS transporter no 0.46
    6 DZA65_RS22510 3-oxoacyl-ACP reductase FabG no 0.45
    7 DZA65_RS12810 YnbE family lipoprotein no 0.43
    8 DZA65_RS08435 biotin-independent malonate decarboxylase subunit gamma no 0.43
    9 DZA65_RS08280 energy transducer TonB no 0.42
    10 DZA65_RS07890 ABC transporter permease no 0.42
    11 DZA65_RS09180 DsbA family protein no 0.42
    12 DZA65_RS11355 methylated-DNA--[protein]-cysteine S-methyltransferase no 0.42
    13 DZA65_RS17260 class I SAM-dependent methyltransferase no 0.42
    14 DZA65_RS14620 DUF4158 domain-containing protein no 0.41
    15 DZA65_RS01510 RNA polymerase factor sigma-54 no 0.41
    16 DZA65_RS10410 GPW/gp25 family protein no 0.41
    17 DZA65_RS21950 heat shock chaperone IbpB no 0.40
    18 DZA65_RS14755 ABC transporter ATP-binding protein no 0.40
    19 DZA65_RS18485 glycoside hydrolase family 1 protein no 0.40
    20 DZA65_RS10085 sensor histidine kinase no 0.40

    Or look for negative cofitness