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  • Top cofit genes for DZA65_RS21950 from Dickeya dianthicola ME23

    heat shock chaperone IbpB
    SEED: 16 kDa heat shock protein B
    KEGG: molecular chaperone IbpB

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS03880 ABC transporter permease no 0.52
    2 DZA65_RS05860 preprotein translocase subunit YajC no 0.50
    3 DZA65_RS03570 hypothetical protein no 0.49
    4 DZA65_RS02785 DUF87 domain-containing protein no 0.49
    5 DZA65_RS02280 FGGY-family carbohydrate kinase no 0.46
    6 DZA65_RS06950 nicotinamide riboside transporter PnuC 0.30 0.46
    7 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW no 0.46
    8 DZA65_RS07650 AIPR family protein no 0.46
    9 DZA65_RS11345 superoxide dismutase no 0.45
    10 DZA65_RS06595 zinc ribbon-containing protein 0.32 0.44
    11 DZA65_RS15185 hypothetical protein no 0.44
    12 DZA65_RS06445 M48 family metallopeptidase 0.31 0.44
    13 DZA65_RS07890 ABC transporter permease no 0.43
    14 DZA65_RS17550 two-component system response regulator BtsR no 0.43
    15 DZA65_RS00685 P1 family peptidase no 0.43
    16 DZA65_RS08915 glycosyltransferase no 0.43
    17 DZA65_RS17875 glycine betaine/L-proline ABC transporter ATP-binding protein ProV no 0.42
    18 DZA65_RS09970 pyruvate formate lyase 1-activating protein no 0.42
    19 DZA65_RS12710 serine/threonine protein phosphatase no 0.42
    20 DZA65_RS21675 chemotaxis protein no 0.42

    Or look for negative cofitness