Top cofit genes for DZA65_RS21930 from Dickeya dianthicola ME23

two-component system response regulator DcuR
SEED: Fumarate respiration transcriptional regulator DcuR
KEGG: two-component system, CitB family, response regulator DcuR

Rank Hit Name Description Conserved? Cofitness  
1 DZA65_RS13530 transcription-repair coupling factor no 0.76
2 DZA65_RS11655 TerC family protein 0.40 0.74
3 DZA65_RS05830 branched-chain amino acid transport system II carrier protein no 0.74
4 DZA65_RS11285 hypothetical protein no 0.73
5 DZA65_RS13855 carbamoyl-phosphate synthase small subunit no 0.73
6 DZA65_RS00980 Sec-independent protein translocase subunit TatC no 0.72
7 DZA65_RS00640 hypothetical protein no 0.71
8 DZA65_RS13850 Gfo/Idh/MocA family oxidoreductase 0.40 0.71
9 DZA65_RS13865 methyltransferase 0.31 0.71
10 DZA65_RS21490 DNA-binding transcriptional regulator CytR 0.65 0.71
11 DZA65_RS13860 DegT/DnrJ/EryC1/StrS family aminotransferase no 0.71
12 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no 0.69
13 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase 0.59 0.69
14 DZA65_RS21850 dicarboxylate/amino acid:cation symporter 0.85 0.69
15 DZA65_RS14075 chemotaxis protein CheA no 0.68
16 DZA65_RS22220 oxygen-independent coproporphyrinogen III oxidase 0.64 0.68
17 DZA65_RS13935 flagellar motor switch protein FliN no 0.68
18 DZA65_RS14050 chemotaxis protein CheY 0.56 0.68
19 DZA65_RS21115 class I adenylate cyclase no 0.68
20 DZA65_RS13840 hypothetical protein 0.32 0.68

Or look for negative cofitness