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  • Top cofit genes for DZA65_RS21790 from Dickeya dianthicola ME23

    sulfurtransferase TusA
    SEED: tRNA 5-methylaminomethyl-2-thiouridine synthase TusA
    KEGG: tRNA 2-thiouridine synthesizing protein A

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS08935 NAD-dependent malic enzyme no 0.58
    2 DZA65_RS13800 RpiB/LacA/LacB family sugar-phosphate isomerase no 0.56
    3 DZA65_RS18735 excinuclease ABC subunit UvrA no 0.54
    4 DZA65_RS22195 ribosome-dependent GTPase TypA no 0.53
    5 DZA65_RS01760 cell division protein FtsP no 0.52
    6 DZA65_RS06825 succinate dehydrogenase cytochrome b556 subunit 0.50 0.52
    7 DZA65_RS00260 DUF3053 domain-containing protein no 0.52
    8 DZA65_RS06465 outer membrane protein assembly factor BamC no 0.52
    9 DZA65_RS19175 catabolite repressor/activator no 0.50
    10 DZA65_RS19730 GDP-mannose 4,6-dehydratase no 0.49
    11 DZA65_RS06835 succinate dehydrogenase flavoprotein subunit 0.50 0.49
    12 DZA65_RS19745 GDP-L-fucose synthase no 0.49
    13 DZA65_RS19750 hypothetical protein no 0.48
    14 DZA65_RS21615 envelope stress sensor histidine kinase CpxA no 0.48
    15 DZA65_RS19290 hypothetical protein no 0.48
    16 DZA65_RS06840 succinate dehydrogenase iron-sulfur subunit no 0.48
    17 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC no 0.48
    18 DZA65_RS19725 phosphomannomutase/phosphoglucomutase no 0.48
    19 DZA65_RS17905 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA no 0.48
    20 DZA65_RS13770 HAMP domain-containing protein no 0.48

    Or look for negative cofitness