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Cofit
Top cofit genes for DZA65_RS21700 from
Dickeya dianthicola ME23
LysR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS10265
NUDIX domain-containing protein
no
0.60
2
DZA65
_RS05760
methionine synthase
no
0.52
3
DZA65
_RS20065
HlyD family efflux transporter periplasmic adaptor subunit
no
0.48
4
DZA65
_RS02900
pirin family protein
no
0.45
5
DZA65
_RS07975
phosphonate C-P lyase system protein PhnK
no
0.43
6
DZA65
_RS09460
YejL family protein
no
0.43
7
DZA65
_RS18565
ABC transporter ATP-binding protein
no
0.43
8
DZA65
_RS12940
envelope stress response membrane protein PspB
no
0.43
9
DZA65
_RS17820
transporter substrate-binding domain-containing protein
no
0.41
10
DZA65
_RS16445
hypothetical protein
no
0.41
11
DZA65
_RS10975
threonylcarbamoyl-AMP synthase
no
0.41
12
DZA65
_RS14775
TolC family protein
no
0.40
13
DZA65
_RS02700
L-talarate/galactarate dehydratase
no
0.40
14
DZA65
_RS10325
lipoprotein
no
0.40
15
DZA65
_RS05225
ornithine decarboxylase
no
0.40
16
DZA65
_RS05670
L-tyrosine/L-tryptophan isonitrile synthase family protein
no
0.40
17
DZA65
_RS08595
type VI secretion system-associated protein TagO
no
0.40
18
DZA65
_RS17815
amino acid ABC transporter permease
no
0.40
19
DZA65
_RS18155
two-component sensor histidine kinase BarA
no
0.40
20
DZA65
_RS08320
ABC transporter substrate-binding protein
no
0.40
Or look for
negative cofitness