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  • Top cofit genes for DZA65_RS21700 from Dickeya dianthicola ME23

    LysR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS10265 NUDIX domain-containing protein no 0.60
    2 DZA65_RS05760 methionine synthase no 0.52
    3 DZA65_RS20065 HlyD family efflux transporter periplasmic adaptor subunit no 0.48
    4 DZA65_RS02900 pirin family protein no 0.45
    5 DZA65_RS07975 phosphonate C-P lyase system protein PhnK no 0.43
    6 DZA65_RS09460 YejL family protein no 0.43
    7 DZA65_RS18565 ABC transporter ATP-binding protein no 0.43
    8 DZA65_RS12940 envelope stress response membrane protein PspB no 0.43
    9 DZA65_RS17820 transporter substrate-binding domain-containing protein no 0.41
    10 DZA65_RS16445 hypothetical protein no 0.41
    11 DZA65_RS10975 threonylcarbamoyl-AMP synthase no 0.41
    12 DZA65_RS14775 TolC family protein no 0.40
    13 DZA65_RS02700 L-talarate/galactarate dehydratase no 0.40
    14 DZA65_RS10325 lipoprotein no 0.40
    15 DZA65_RS05225 ornithine decarboxylase no 0.40
    16 DZA65_RS05670 L-tyrosine/L-tryptophan isonitrile synthase family protein no 0.40
    17 DZA65_RS08595 type VI secretion system-associated protein TagO no 0.40
    18 DZA65_RS17815 amino acid ABC transporter permease no 0.40
    19 DZA65_RS18155 two-component sensor histidine kinase BarA no 0.40
    20 DZA65_RS08320 ABC transporter substrate-binding protein no 0.40

    Or look for negative cofitness