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  • Top cofit genes for DZA65_RS21565 from Dickeya dianthicola ME23

    agmatine deiminase
    SEED: Agmatine deiminase (EC 3.5.3.12)
    KEGG: agmatine deiminase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS05445 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.70 0.72
    2 DZA65_RS21570 N-carbamoylputrescine amidase 0.77 0.72
    3 DZA65_RS10915 septation protein A no 0.69
    4 DZA65_RS21420 glutamate racemase 0.57 0.67
    5 DZA65_RS13750 glucans biosynthesis glucosyltransferase MdoH 0.26 0.66
    6 DZA65_RS12765 two-component system sensor histidine kinase RstB no 0.63
    7 DZA65_RS12760 two-component system response regulator RstA 0.55 0.62
    8 DZA65_RS13755 glucan biosynthesis protein G no 0.60
    9 DZA65_RS00035 oligopeptidase A 0.67 0.60
    10 DZA65_RS15340 colicin V production protein no 0.58
    11 DZA65_RS15520 tRNA-Arg no 0.55
    12 DZA65_RS22335 low affinity potassium transporter Kup 0.59 0.55
    13 DZA65_RS07170 UTP--glucose-1-phosphate uridylyltransferase no 0.54
    14 DZA65_RS16810 nitrogen regulatory protein P-II no 0.53
    15 DZA65_RS22195 ribosome-dependent GTPase TypA 0.48 0.53
    16 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.31 0.53
    17 DZA65_RS11120 mannose-6-phosphate isomerase no 0.51
    18 DZA65_RS19730 GDP-mannose 4,6-dehydratase no 0.51
    19 DZA65_RS19725 phosphomannomutase/phosphoglucomutase no 0.50
    20 DZA65_RS01565 lipid asymmetry maintenance protein MlaB no 0.50

    Or look for negative cofitness