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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS21265 from
Dickeya dianthicola ME23
thioredoxin TrxA
SEED: Thioredoxin
KEGG: thioredoxin 1
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS09975
formate C-acetyltransferase
0.40
0.54
2
DZA65
_RS04230
outer membrane protein assembly factor BamE
0.60
0.53
3
DZA65
_RS15780
extracellular solute-binding protein
0.56
0.52
4
DZA65
_RS06115
multidrug efflux RND transporter permease subunit
0.62
0.51
5
DZA65
_RS00795
glycosyltransferase family 9 protein
no
0.50
6
DZA65
_RS17575
ABC transporter permease
0.70
0.50
7
DZA65
_RS01880
anaerobic ribonucleoside-triphosphate reductase
0.59
0.49
8
DZA65
_RS00365
DMT family transporter
0.45
0.49
9
DZA65
_RS15765
galactosidase
no
0.49
10
DZA65
_RS21510
1,4-dihydroxy-2-naphthoate polyprenyltransferase
0.47
0.49
11
DZA65
_RS06120
efflux RND transporter periplasmic adaptor subunit
0.59
0.47
12
DZA65
_RS07125
dTDP-4-dehydrorhamnose reductase
0.77
0.47
13
DZA65
_RS02490
phosphoserine phosphatase
0.80
0.47
14
DZA65
_RS16610
IMP dehydrogenase
0.56
0.47
15
DZA65
_RS09225
MFS transporter
0.60
0.46
16
DZA65
_RS01405
RNase E specificity factor CsrD
0.68
0.46
17
DZA65
_RS10485
membrane protein
no
0.46
18
DZA65
_RS10810
formyltetrahydrofolate deformylase
0.64
0.45
19
DZA65
_RS06465
outer membrane protein assembly factor BamC
0.77
0.45
20
DZA65
_RS04370
cysteine synthase A
0.77
0.45
Or look for
negative cofitness