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  • Top cofit genes for DZA65_RS21145 from Dickeya dianthicola ME23

    amino acid ABC transporter ATP-binding protein
    SEED: ABC-type polar amino acid transport system, ATPase component

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06075 acyl-CoA thioesterase II 0.55 0.47
    2 DZA65_RS12515 GAF domain-containing protein no 0.44
    3 DZA65_RS03410 tRNA-Leu no 0.44
    4 DZA65_RS06730 LexA regulated protein no 0.42
    5 DZA65_RS08995 uridine diphosphate-N-acetylglucosamine-binding protein YvcK no 0.42
    6 DZA65_RS21785 lysoplasmalogenase no 0.41
    7 DZA65_RS22165 uracil-xanthine permease 0.66 0.40
    8 DZA65_RS18530 glycoside hydrolase family 1 protein no 0.39
    9 DZA65_RS07435 As(III)-sensing metalloregulatory transcriptional repressor ArsR no 0.39
    10 DZA65_RS06205 methyl-accepting chemotaxis protein no 0.39
    11 DZA65_RS00730 ribonuclease PH no 0.39
    12 DZA65_RS15860 ATP-binding cassette domain-containing protein no 0.39
    13 DZA65_RS17325 polyphenol oxidase 0.27 0.38
    14 DZA65_RS11495 AvrE-family type 3 secretion system effector 0.50 0.38
    15 DZA65_RS11350 chemoreceptor no 0.37
    16 DZA65_RS18475 lysophospholipid transporter LplT 0.43 0.37
    17 DZA65_RS15430 type 1 glutamine amidotransferase domain-containing protein no 0.37
    18 DZA65_RS19980 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN no 0.37
    19 DZA65_RS07900 ABC transporter substrate-binding protein no 0.37
    20 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA no 0.36

    Or look for negative cofitness