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  • Top cofit genes for DZA65_RS21130 from Dickeya dianthicola ME23

    uroporphyrinogen-III C-methyltransferase
    SEED: Homolog of E. coli HemX protein
    KEGG: uroporphyrin-III C-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS22340 ATPase RavA no 0.51
    2 DZA65_RS22345 ATPase RavA stimulator ViaA no 0.48
    3 DZA65_RS13635 endolytic transglycosylase MltG 0.37 0.44
    4 DZA65_RS21620 hypothetical protein no 0.44
    5 DZA65_RS03745 AI-2E family transporter 0.63 0.43
    6 DZA65_RS08375 ABC transporter substrate-binding protein no 0.42
    7 DZA65_RS16865 sensor domain-containing diguanylate cyclase no 0.40
    8 DZA65_RS16740 ABC transporter substrate-binding protein 0.72 0.39
    9 DZA65_RS11280 GMC family oxidoreductase no 0.38
    10 DZA65_RS14820 formate dehydrogenase cytochrome b556 subunit 0.76 0.38
    11 DZA65_RS06690 ROK family protein 0.81 0.38
    12 DZA65_RS04325 efflux RND transporter periplasmic adaptor subunit no 0.38
    13 DZA65_RS09255 biotin-dependent carboxyltransferase no 0.38
    14 DZA65_RS00840 rhodanese-like domain-containing protein 0.85 0.37
    15 DZA65_RS20220 glucose-6-phosphate isomerase 0.83 0.37
    16 DZA65_RS07075 TerC family protein 0.83 0.37
    17 DZA65_RS16750 ABC transporter ATP-binding protein no 0.36
    18 DZA65_RS01780 DedA family protein 0.73 0.35
    19 DZA65_RS16455 phage tail protein no 0.35
    20 DZA65_RS02325 ABC transporter permease no 0.34

    Or look for negative cofitness