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  • Top cofit genes for DZA65_RS21060 from Dickeya dianthicola ME23

    EamA family transporter RarD
    SEED: Protein rarD
    KEGG: chloramphenicol-sensitive protein RarD

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21875 UDP-forming cellulose synthase catalytic subunit 0.42 0.46
    2 DZA65_RS14810 MFS transporter no 0.43
    3 DZA65_RS17830 gamma-glutamyltransferase family protein 0.68 0.39
    4 DZA65_RS08435 biotin-independent malonate decarboxylase subunit gamma no 0.39
    5 DZA65_RS10075 HAMP domain-containing protein no 0.36
    6 DZA65_RS16755 ABC transporter substrate-binding protein no 0.35
    7 DZA65_RS04845 DUF2857 domain-containing protein no 0.35
    8 DZA65_RS19785 SDR family oxidoreductase no 0.34
    9 DZA65_RS12305 amino acid ABC transporter permease no 0.33
    10 DZA65_RS04550 rhamnogalacturonate lyase no 0.33
    11 DZA65_RS09965 LysR family transcriptional regulator no 0.33
    12 DZA65_RS20680 glycoside hydrolase family 19 protein no 0.32
    13 DZA65_RS22520 diguanylate cyclase no 0.32
    14 DZA65_RS22450 acyl carrier protein 0.43 0.32
    15 DZA65_RS11890 cupin domain-containing protein no 0.32
    16 DZA65_RS05320 prepilin peptidase-dependent protein no 0.32
    17 DZA65_RS11280 GMC family oxidoreductase no 0.32
    18 DZA65_RS13230 DUF1471 domain-containing protein no 0.32
    19 DZA65_RS03440 glycine cleavage system protein GcvH 0.61 0.31
    20 DZA65_RS11300 extracellular solute-binding protein no 0.31

    Or look for negative cofitness