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  • Top cofit genes for DZA65_RS21040 from Dickeya dianthicola ME23

    threonine export protein RhtC
    SEED: L-lysine permease
    KEGG: threonine efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07455 IS3 family transposase no 0.58
    2 DZA65_RS07625 type IV secretion system protein VirB5 no 0.56
    3 DZA65_RS13545 arylamine N-acetyltransferase no 0.56
    4 DZA65_RS04300 LuxR family transcriptional regulator no 0.53
    5 DZA65_RS16960 tRNA-Ala no 0.51
    6 DZA65_RS09740 alpha/beta hydrolase no 0.51
    7 DZA65_RS18615 LysR family transcriptional regulator no 0.50
    8 DZA65_RS13440 porin no 0.49
    9 DZA65_RS04305 cytosine permease no 0.49
    10 DZA65_RS22325 response regulator 0.47 0.48
    11 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.42 0.48
    12 DZA65_RS00580 LysR family transcriptional regulator no 0.47
    13 DZA65_RS11170 mannosyl-3-phosphoglycerate phosphatase-related protein 0.43 0.46
    14 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.45
    15 DZA65_RS05575 DUF4102 domain-containing protein no 0.44
    16 DZA65_RS12515 GAF domain-containing protein 0.50 0.44
    17 DZA65_RS19370 threonine/serine exporter ThrE family protein 0.11 0.44
    18 DZA65_RS07350 tannase/feruloyl esterase family alpha/beta hydrolase no 0.43
    19 DZA65_RS14665 LysR family transcriptional regulator no 0.43
    20 DZA65_RS14595 cupin no 0.43

    Or look for negative cofitness