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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS20995 from
Dickeya dianthicola ME23
pirin family protein
SEED: Qercetin 2,3-dioxygenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS01900
ABC transporter permease
no
0.51
2
DZA65
_RS18355
DUF488 family protein
0.30
0.46
3
DZA65
_RS05985
cytochrome o ubiquinol oxidase subunit II
0.19
0.45
4
DZA65
_RS10575
MurR/RpiR family transcriptional regulator
0.43
0.44
5
DZA65
_RS20665
helix-turn-helix domain-containing protein
no
0.43
6
DZA65
_RS15370
tRNA pseudouridine(38-40) synthase TruA
0.58
0.43
7
DZA65
_RS04080
hypothetical protein
0.54
0.43
8
DZA65
_RS09535
ABC transporter substrate-binding protein
0.48
0.43
9
DZA65
_RS21140
amidohydrolase
no
0.43
10
DZA65
_RS00015
DNA replication/repair protein RecF
0.23
0.41
11
DZA65
_RS07025
pyridoxal phosphatase
no
0.41
12
DZA65
_RS22540
phosphate ABC transporter substrate-binding protein PstS
no
0.41
13
DZA65
_RS17535
GTPase
0.65
0.40
14
DZA65
_RS05425
tRNA pseudouridine(65) synthase TruC
0.55
0.40
15
DZA65
_RS18150
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
0.44
0.40
16
DZA65
_RS03825
DinI family protein
no
0.40
17
DZA65
_RS05180
hypothetical protein
no
0.40
18
DZA65
_RS03755
helix-turn-helix transcriptional regulator
no
0.39
19
DZA65
_RS12725
ABC transporter ATP-binding protein
no
0.38
20
DZA65
_RS19090
DUF721 domain-containing protein
no
0.38
Or look for
negative cofitness