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  • Top cofit genes for DZA65_RS20995 from Dickeya dianthicola ME23

    pirin family protein
    SEED: Qercetin 2,3-dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS01900 ABC transporter permease no 0.51
    2 DZA65_RS18355 DUF488 family protein 0.30 0.46
    3 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.19 0.45
    4 DZA65_RS10575 MurR/RpiR family transcriptional regulator 0.43 0.44
    5 DZA65_RS20665 helix-turn-helix domain-containing protein no 0.43
    6 DZA65_RS15370 tRNA pseudouridine(38-40) synthase TruA 0.58 0.43
    7 DZA65_RS04080 hypothetical protein 0.54 0.43
    8 DZA65_RS09535 ABC transporter substrate-binding protein 0.48 0.43
    9 DZA65_RS21140 amidohydrolase no 0.43
    10 DZA65_RS00015 DNA replication/repair protein RecF 0.23 0.41
    11 DZA65_RS07025 pyridoxal phosphatase no 0.41
    12 DZA65_RS22540 phosphate ABC transporter substrate-binding protein PstS no 0.41
    13 DZA65_RS17535 GTPase 0.65 0.40
    14 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC 0.55 0.40
    15 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 0.40
    16 DZA65_RS03825 DinI family protein no 0.40
    17 DZA65_RS05180 hypothetical protein no 0.40
    18 DZA65_RS03755 helix-turn-helix transcriptional regulator no 0.39
    19 DZA65_RS12725 ABC transporter ATP-binding protein no 0.38
    20 DZA65_RS19090 DUF721 domain-containing protein no 0.38

    Or look for negative cofitness