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  • Top cofit genes for DZA65_RS20940 from Dickeya dianthicola ME23

    cold-shock protein
    SEED: Cold shock protein CspG
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS20045 TolC family protein no 0.52
    2 DZA65_RS11980 type II toxin-antitoxin system RelE/ParE family toxin no 0.48
    3 DZA65_RS07870 HTH-type transcriptional regulator Cbl no 0.46
    4 DZA65_RS13405 FMNH2-dependent alkanesulfonate monooxygenase no 0.45
    5 DZA65_RS17625 acyl carrier protein no 0.44
    6 DZA65_RS03305 deoxyribose-phosphate aldolase no 0.42
    7 DZA65_RS11185 acyltransferase family protein no 0.42
    8 DZA65_RS05170 hypothetical protein no 0.41
    9 DZA65_RS18780 phage tail protein no 0.40
    10 DZA65_RS11230 serralysin family metalloprotease no 0.40
    11 DZA65_RS20335 DNA-protecting protein DprA no 0.40
    12 DZA65_RS16315 pectate lyase no 0.40
    13 DZA65_RS04780 hypothetical protein no 0.39
    14 DZA65_RS18495 PTS transporter subunit EIIC no 0.39
    15 DZA65_RS21435 YijD family membrane protein no 0.38
    16 DZA65_RS14820 formate dehydrogenase cytochrome b556 subunit no 0.38
    17 DZA65_RS16580 DUF1317 family protein no 0.38
    18 DZA65_RS17580 ABC transporter permease no 0.38
    19 DZA65_RS00240 urea carboxylase-associated family protein no 0.38
    20 DZA65_RS15805 pectate lyase no 0.37

    Or look for negative cofitness