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  • Top cofit genes for DZA65_RS20705 from Dickeya dianthicola ME23

    polysaccharide lyase
    SEED: Pectate lyase B precursor (EC 4.2.2.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04305 cytosine permease 0.35 0.60
    2 DZA65_RS04300 LuxR family transcriptional regulator no 0.58
    3 DZA65_RS13830 flagella biosynthesis regulatory protein FliZ no 0.57
    4 DZA65_RS13440 porin no 0.57
    5 DZA65_RS22045 sugar ABC transporter permease no 0.56
    6 DZA65_RS09740 alpha/beta hydrolase no 0.56
    7 DZA65_RS14265 enoyl-CoA hydratase no 0.56
    8 DZA65_RS06075 acyl-CoA thioesterase II no 0.54
    9 DZA65_RS08765 DUF2971 domain-containing protein no 0.53
    10 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.53
    11 DZA65_RS14695 glycosyltransferase no 0.52
    12 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.52
    13 DZA65_RS09725 methionine ABC transporter ATPase no 0.51
    14 DZA65_RS13545 arylamine N-acetyltransferase no 0.51
    15 DZA65_RS21795 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter no 0.51
    16 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.50
    17 DZA65_RS02630 hypothetical protein no 0.50
    18 DZA65_RS12515 GAF domain-containing protein no 0.50
    19 DZA65_RS20360 large-conductance mechanosensitive channel protein MscL no 0.50
    20 DZA65_RS08625 GGDEF domain-containing protein no 0.50

    Or look for negative cofitness