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  • Top cofit genes for DZA65_RS20165 from Dickeya dianthicola ME23

    miniconductance mechanosensitive channel MscM

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07070 outer membrane assembly protein AsmA no 0.70
    2 DZA65_RS11840 protease HtpX no 0.70
    3 DZA65_RS20850 LTA synthase family protein no 0.62
    4 DZA65_RS22620 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA 0.40 0.58
    5 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF no 0.58
    6 DZA65_RS01670 DnaA initiator-associating protein DiaA 0.49 0.55
    7 DZA65_RS05995 hypothetical protein 0.53 0.55
    8 DZA65_RS17280 endonuclease/exonuclease/phosphatase family protein 0.50 0.48
    9 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase no 0.48
    10 DZA65_RS09590 LysR family transcriptional regulator 0.50 0.47
    11 DZA65_RS02855 FxsA family protein no 0.46
    12 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase no 0.45
    13 DZA65_RS21445 Si-specific NAD(P)(+) transhydrogenase no 0.45
    14 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.30 0.43
    15 DZA65_RS18295 outer membrane protein assembly factor 0.52 0.43
    16 DZA65_RS16740 ABC transporter substrate-binding protein no 0.43
    17 DZA65_RS13130 C40 family peptidase no 0.43
    18 DZA65_RS18730 diguanylate cyclase no 0.41
    19 DZA65_RS11885 two-component system sensor histidine kinase PhoQ 0.55 0.41
    20 DZA65_RS04375 sulfate transporter CysZ no 0.41

    Or look for negative cofitness