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  • Top cofit genes for DZA65_RS20125 from Dickeya dianthicola ME23

    LysR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04035 DUF2732 domain-containing protein no 0.56
    2 DZA65_RS06615 glutamate/aspartate ABC transporter substrate-binding protein no 0.55
    3 DZA65_RS00675 isoaspartyl peptidase/L-asparaginase no 0.55
    4 DZA65_RS15610 hotdog fold thioesterase no 0.54
    5 DZA65_RS12755 hypothetical protein no 0.51
    6 DZA65_RS09650 S-formylglutathione hydrolase 0.21 0.51
    7 DZA65_RS01570 BolA family iron metabolism protein IbaG no 0.50
    8 DZA65_RS22475 glycosyltransferase family 2 protein no 0.50
    9 DZA65_RS18220 hypothetical protein no 0.49
    10 DZA65_RS20090 DMT family transporter no 0.49
    11 DZA65_RS15565 hypothetical protein no 0.49
    12 DZA65_RS12475 CAR family subclass B3 metallo-beta-lactamase no 0.48
    13 DZA65_RS12445 NUDIX domain-containing protein no 0.48
    14 DZA65_RS12200 RNA polymerase sigma factor no 0.48
    15 DZA65_RS12210 type III secretion system export apparatus subunit SctV no 0.47
    16 DZA65_RS19995 hypothetical protein no 0.47
    17 DZA65_RS14410 TrbG/VirB9 family P-type conjugative transfer protein no 0.47
    18 DZA65_RS21250 ECA polysaccharide chain length modulation protein no 0.46
    19 DZA65_RS19790 biotin attachment protein no 0.46
    20 DZA65_RS21915 dipeptide ABC transporter permease DppB 0.32 0.46

    Or look for negative cofitness