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  • Top cofit genes for DZA65_RS20045 from Dickeya dianthicola ME23

    TolC family protein
    SEED: Outer membrane protein assembly factor YaeT precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS09615 acyl carrier protein 0.44 0.60
    2 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD no 0.53
    3 DZA65_RS20940 cold-shock protein no 0.52
    4 DZA65_RS09120 class IV adenylate cyclase no 0.51
    5 DZA65_RS00410 helix-turn-helix transcriptional regulator no 0.50
    6 DZA65_RS03305 deoxyribose-phosphate aldolase no 0.50
    7 DZA65_RS00425 sigma-54-dependent Fis family transcriptional regulator no 0.48
    8 DZA65_RS00430 histidine kinase no 0.48
    9 DZA65_RS00415 ABC transporter ATP-binding protein no 0.48
    10 DZA65_RS14200 SDR family NAD(P)-dependent oxidoreductase no 0.48
    11 DZA65_RS10630 response regulator no 0.47
    12 DZA65_RS12755 hypothetical protein no 0.47
    13 DZA65_RS18330 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase no 0.47
    14 DZA65_RS21250 ECA polysaccharide chain length modulation protein no 0.46
    15 DZA65_RS04780 hypothetical protein no 0.46
    16 DZA65_RS22110 long-chain-fatty-acid--CoA ligase no 0.45
    17 DZA65_RS09550 elongation factor P-like protein YeiP no 0.45
    18 DZA65_RS13555 glycoside hydrolase family 31 protein no 0.45
    19 DZA65_RS00630 sulfotransferase family 2 domain-containing protein no 0.44
    20 DZA65_RS18920 D-threonate 4-phosphate dehydrogenase no 0.44

    Or look for negative cofitness