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  • Top cofit genes for DZA65_RS20005 from Dickeya dianthicola ME23

    helix-turn-helix transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS08260 sensor domain-containing diguanylate cyclase no 0.43
    2 DZA65_RS09220 MarR family transcriptional regulator no 0.41
    3 DZA65_RS12925 TIGR01620 family protein no 0.40
    4 DZA65_RS07380 Lrp/AsnC family transcriptional regulator no 0.40
    5 DZA65_RS04355 phosphoenolpyruvate-protein phosphotransferase PtsI no 0.40
    6 DZA65_RS09630 ABC transporter permease no 0.40
    7 DZA65_RS03055 FAD:protein FMN transferase no 0.38
    8 DZA65_RS08455 LysR family transcriptional regulator no 0.38
    9 DZA65_RS06615 glutamate/aspartate ABC transporter substrate-binding protein no 0.38
    10 DZA65_RS02340 M20 family metallopeptidase no 0.38
    11 DZA65_RS03480 MHS family MFS transporter no 0.37
    12 DZA65_RS00330 DNA-binding transcriptional regulator no 0.36
    13 DZA65_RS01840 sucrose-6-phosphate hydrolase no 0.35
    14 DZA65_RS12800 ATP-dependent RNA helicase HrpA no 0.35
    15 DZA65_RS03835 VOC family protein no 0.35
    16 DZA65_RS21175 iron-containing alcohol dehydrogenase family protein no 0.35
    17 DZA65_RS18570 ABC transporter permease no 0.34
    18 DZA65_RS20910 glycogen phosphorylase no 0.34
    19 DZA65_RS19375 LysE family transporter no 0.34
    20 DZA65_RS16410 hypothetical protein no 0.33

    Or look for negative cofitness