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  • Top cofit genes for DZA65_RS19880 from Dickeya dianthicola ME23

    MarR family transcriptional regulator
    SEED: Organic hydroperoxide resistance transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04935 type IV prepilin no 0.46
    2 DZA65_RS03290 SCP2 domain-containing protein 0.61 0.44
    3 DZA65_RS16450 hypothetical protein no 0.43
    4 DZA65_RS15140 DUF1804 family protein no 0.43
    5 DZA65_RS09075 ATP-dependent RNA helicase RhlE 0.40 0.42
    6 DZA65_RS02665 ROK family transcriptional regulator no 0.42
    7 DZA65_RS22010 NAD(P)/FAD-dependent oxidoreductase 0.65 0.42
    8 DZA65_RS22205 nitrogen regulation protein NR(II) 0.83 0.41
    9 DZA65_RS15025 DUF2313 domain-containing protein no 0.40
    10 DZA65_RS16030 phosphate ABC transporter ATP-binding protein no 0.39
    11 DZA65_RS03490 bifunctional protein-disulfide isomerase/oxidoreductase DsbC no 0.39
    12 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC no 0.39
    13 DZA65_RS09715 PQQ-dependent sugar dehydrogenase no 0.38
    14 DZA65_RS00705 ABC transporter ATP-binding protein no 0.38
    15 DZA65_RS08385 nucleoside hydrolase no 0.38
    16 DZA65_RS03515 tRNA-Gly no 0.38
    17 DZA65_RS09235 5-oxoprolinase subunit PxpA 0.57 0.37
    18 DZA65_RS12760 two-component system response regulator RstA 0.52 0.37
    19 DZA65_RS22300 ribose ABC transporter substrate-binding protein RbsB no 0.37
    20 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase no 0.36

    Or look for negative cofitness