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  • Top cofit genes for DZA65_RS19855 from Dickeya dianthicola ME23

    ABC transporter substrate-binding protein
    SEED: Periplasmic binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15015 tail fiber assembly protein no 0.46
    2 DZA65_RS12755 hypothetical protein no 0.43
    3 DZA65_RS14740 uroporphyrinogen-III C-methyltransferase no 0.43
    4 DZA65_RS09560 sugar efflux transporter no 0.41
    5 DZA65_RS07840 hydrogenase 4 membrane subunit no 0.40
    6 DZA65_RS06450 thioredoxin-dependent thiol peroxidase no 0.40
    7 DZA65_RS08590 sigma-54-dependent Fis family transcriptional regulator no 0.39
    8 DZA65_RS08040 type I-C CRISPR-associated endonuclease Cas1 no 0.39
    9 DZA65_RS17710 YfiR family protein no 0.39
    10 DZA65_RS00635 hypothetical protein no 0.39
    11 DZA65_RS11845 EAL domain-containing protein no 0.38
    12 DZA65_RS20870 DNA utilization protein GntX no 0.38
    13 DZA65_RS20580 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.37
    14 DZA65_RS13140 HTH-type transcriptional repressor PurR 0.24 0.37
    15 DZA65_RS15680 type II secretion system secretin GspD no 0.37
    16 DZA65_RS04580 response regulator transcription factor no 0.36
    17 DZA65_RS07000 molybdenum-dependent transcriptional regulator 0.24 0.36
    18 DZA65_RS15675 type II secretion system ATPase GspE no 0.36
    19 DZA65_RS09445 response regulator no 0.36
    20 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.60 0.36

    Or look for negative cofitness