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  • Top cofit genes for DZA65_RS19785 from Dickeya dianthicola ME23

    SDR family oxidoreductase
    SEED: Oxidoreductase, short chain dehydrogenase/reductase family

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00125 MFS transporter no 0.49
    2 DZA65_RS02315 ABC transporter substrate-binding protein no 0.46
    3 DZA65_RS09965 LysR family transcriptional regulator no 0.45
    4 DZA65_RS03920 helix-turn-helix domain-containing protein no 0.43
    5 DZA65_RS02740 glycosyltransferase family 4 protein no 0.42
    6 DZA65_RS22840 hypothetical protein no 0.39
    7 DZA65_RS18770 phage tail sheath family protein no 0.39
    8 DZA65_RS21950 heat shock chaperone IbpB no 0.39
    9 DZA65_RS21675 chemotaxis protein no 0.38
    10 DZA65_RS00080 MBOAT family protein 0.45 0.38
    11 DZA65_RS12640 tail fiber protein no 0.38
    12 DZA65_RS06520 deaminated glutathione amidase no 0.37
    13 DZA65_RS05990 muropeptide MFS transporter AmpG no 0.37
    14 DZA65_RS11890 cupin domain-containing protein no 0.37
    15 DZA65_RS04615 alpha/beta hydrolase no 0.36
    16 DZA65_RS03880 ABC transporter permease no 0.36
    17 DZA65_RS07540 hypothetical protein no 0.36
    18 DZA65_RS17170 ABC transporter permease 0.41 0.36
    19 DZA65_RS22925 hypothetical protein no 0.36
    20 DZA65_RS16635 outer membrane protein assembly factor BamB no 0.35

    Or look for negative cofitness