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  • Top cofit genes for DZA65_RS19770 from Dickeya dianthicola ME23

    amino acid ABC transporter ATP-binding protein
    SEED: Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00920 hypothetical protein no 0.54
    2 DZA65_RS11215 potassium transporter Kup no 0.46
    3 DZA65_RS14305 D-serine/D-alanine/glycine transporter no 0.46
    4 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase 0.32 0.44
    5 DZA65_RS14230 KR domain-containing protein no 0.43
    6 DZA65_RS07430 arsenite efflux transporter metallochaperone ArsD no 0.41
    7 DZA65_RS01715 ADP-ribose diphosphatase no 0.41
    8 DZA65_RS12920 MFS transporter no 0.41
    9 DZA65_RS17320 ATP-dependent chaperone ClpB 0.32 0.40
    10 DZA65_RS22315 D-ribose pyranase no 0.40
    11 DZA65_RS16095 acylphosphatase no 0.40
    12 DZA65_RS19295 hypothetical protein no 0.40
    13 DZA65_RS09215 outer membrane protein OmpX no 0.40
    14 DZA65_RS09350 helix-turn-helix domain-containing protein no 0.39
    15 DZA65_RS00700 glutathione ABC transporter substrate-binding protein 0.32 0.39
    16 DZA65_RS17260 class I SAM-dependent methyltransferase no 0.39
    17 DZA65_RS17050 family 78 glycoside hydrolase catalytic domain no 0.39
    18 DZA65_RS10860 oligopeptide ABC transporter substrate-binding protein OppA no 0.39
    19 DZA65_RS22575 amino acid ABC transporter permease no 0.39
    20 DZA65_RS05550 Rho-binding antiterminator no 0.38

    Or look for negative cofitness