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  • Top cofit genes for DZA65_RS19085 from Dickeya dianthicola ME23

    secA regulator SecM
    SEED: Secretion monitor precursor
    KEGG: secretion monitor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06400 galactose/glucose ABC transporter substrate-binding protein MglB no 0.42
    2 DZA65_RS15045 tail protein no 0.41
    3 DZA65_RS05015 TIGR03745 family integrating conjugative element membrane protein no 0.40
    4 DZA65_RS18170 2-dehydro-3-deoxyglucarate aldolase no 0.39
    5 DZA65_RS22950 hypothetical protein no 0.38
    6 DZA65_RS08030 phosphonate ABC transporter, permease protein PhnE no 0.38
    7 DZA65_RS01350 DNA-binding transcriptional regulator Fis no 0.37
    8 DZA65_RS08140 type II toxin-antitoxin system HicB family antitoxin no 0.37
    9 DZA65_RS08010 hypothetical protein no 0.37
    10 DZA65_RS09470 sensor histidine kinase no 0.36
    11 DZA65_RS12260 peptide antibiotic transporter SbmA no 0.36
    12 DZA65_RS02505 peptide chain release factor 3 no 0.35
    13 DZA65_RS13045 phosphatidylglycerophosphatase B no 0.35
    14 DZA65_RS15735 cupin domain-containing protein no 0.34
    15 DZA65_RS20775 DUF2531 family protein no 0.34
    16 DZA65_RS21500 ATP-dependent protease subunit HslV no 0.33
    17 DZA65_RS04000 tyrosine-type recombinase/integrase no 0.33
    18 DZA65_RS06360 ABC transporter ATP-binding protein no 0.33
    19 DZA65_RS02945 transcriptional regulator ExuR no 0.33
    20 DZA65_RS17985 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase no 0.33

    Or look for negative cofitness