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  • Top cofit genes for DZA65_RS19040 from Dickeya dianthicola ME23

    prepilin peptidase-dependent pilin
    SEED: Type IV pilin PilA
    KEGG: prepilin peptidase dependent protein D

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS09050 endonuclease/exonuclease/phosphatase family protein 0.32 0.48
    2 DZA65_RS07875 glutamate/aspartate:proton symporter GltP 0.36 0.48
    3 DZA65_RS08245 efflux RND transporter periplasmic adaptor subunit no 0.46
    4 DZA65_RS15505 long-chain fatty acid transporter FadL no 0.45
    5 DZA65_RS16690 Fe-S cluster assembly protein IscX 0.41 0.45
    6 DZA65_RS10480 carboxy-S-adenosyl-L-methionine synthase CmoA 0.77 0.45
    7 DZA65_RS16855 type I secretion system permease/ATPase no 0.43
    8 DZA65_RS03185 ribosome assembly RNA-binding protein YhbY 0.49 0.43
    9 DZA65_RS06385 transporter substrate-binding domain-containing protein no 0.41
    10 DZA65_RS16140 cell division inhibitor SulA no 0.41
    11 DZA65_RS05655 hypothetical protein no 0.41
    12 DZA65_RS04335 HAMP domain-containing protein no 0.40
    13 DZA65_RS03895 myo-inosose-2 dehydratase no 0.40
    14 DZA65_RS12220 type III secretion system ATPase SctN no 0.39
    15 DZA65_RS01485 nucleoside diphosphate kinase regulator no 0.39
    16 DZA65_RS08950 CidA/LrgA family protein no 0.39
    17 DZA65_RS21900 ABC transporter ATP-binding protein 0.18 0.38
    18 DZA65_RS11640 CoA pyrophosphatase no 0.38
    19 DZA65_RS12625 DNA endonuclease SmrA no 0.38
    20 DZA65_RS19670 FtsH protease activity modulator HflK 0.37 0.38

    Or look for negative cofitness