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  • Top cofit genes for DZA65_RS18855 from Dickeya dianthicola ME23

    carbohydrate ABC transporter permease
    SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
    KEGG: multiple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS20780 hypothetical protein no 0.52
    2 DZA65_RS05260 DUF2884 domain-containing protein no 0.44
    3 DZA65_RS03015 transcriptional regulator UhpA no 0.43
    4 DZA65_RS22660 helix-turn-helix domain-containing protein no 0.43
    5 DZA65_RS16180 two-component system sensor histidine kinase BaeS no 0.42
    6 DZA65_RS01805 L-rhamnose/proton symporter RhaT no 0.40
    7 DZA65_RS02370 MFS transporter no 0.38
    8 DZA65_RS20785 PilN domain-containing protein no 0.38
    9 DZA65_RS02135 DNA-binding transcriptional regulator no 0.37
    10 DZA65_RS05825 cobalamin-independent methionine synthase II family protein no 0.37
    11 DZA65_RS01915 hypothetical protein no 0.37
    12 DZA65_RS17230 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI no 0.36
    13 DZA65_RS17010 pyruvate kinase no 0.36
    14 DZA65_RS20580 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.36
    15 DZA65_RS07330 DUF3320 domain-containing protein no 0.36
    16 DZA65_RS04660 alpha/beta hydrolase no 0.35
    17 DZA65_RS15210 hypothetical protein no 0.35
    18 DZA65_RS05760 methionine synthase no 0.35
    19 DZA65_RS05650 hypothetical protein no 0.35
    20 DZA65_RS14990 transcriptional regulator LrhA no 0.35

    Or look for negative cofitness