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  • Top cofit genes for DZA65_RS18795 from Dickeya dianthicola ME23

    type VI secretion system tip protein VgrG

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS20565 phosphoethanolamine transferase EptA no 0.53
    2 DZA65_RS09180 DsbA family protein no 0.52
    3 DZA65_RS14620 DUF4158 domain-containing protein no 0.52
    4 DZA65_RS04000 tyrosine-type recombinase/integrase no 0.51
    5 DZA65_RS22690 IS3 family transposase no 0.49
    6 DZA65_RS12370 MFS transporter no 0.48
    7 DZA65_RS06445 M48 family metallopeptidase no 0.47
    8 DZA65_RS16950 autonomous glycyl radical cofactor GrcA no 0.47
    9 DZA65_RS11650 cellobiose phosphorylase no 0.45
    10 DZA65_RS07395 alpha/beta hydrolase no 0.45
    11 DZA65_RS16390 hypothetical protein no 0.44
    12 DZA65_RS12810 YnbE family lipoprotein no 0.43
    13 DZA65_RS11345 superoxide dismutase no 0.42
    14 DZA65_RS11355 methylated-DNA--[protein]-cysteine S-methyltransferase no 0.42
    15 DZA65_RS11065 L-arabinose isomerase no 0.42
    16 DZA65_RS14540 SnoaL-like domain-containing protein no 0.42
    17 DZA65_RS11500 hypothetical protein no 0.40
    18 DZA65_RS12225 type III secretion protein no 0.39
    19 DZA65_RS00025 MFS transporter no 0.39
    20 DZA65_RS11470 ATP-dependent RNA helicase DbpA no 0.39

    Or look for negative cofitness