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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS18795 from
Dickeya dianthicola ME23
type VI secretion system tip protein VgrG
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS20565
phosphoethanolamine transferase EptA
no
0.53
2
DZA65
_RS09180
DsbA family protein
no
0.52
3
DZA65
_RS14620
DUF4158 domain-containing protein
no
0.52
4
DZA65
_RS04000
tyrosine-type recombinase/integrase
no
0.51
5
DZA65
_RS22690
IS3 family transposase
no
0.49
6
DZA65
_RS12370
MFS transporter
no
0.48
7
DZA65
_RS06445
M48 family metallopeptidase
no
0.47
8
DZA65
_RS16950
autonomous glycyl radical cofactor GrcA
no
0.47
9
DZA65
_RS11650
cellobiose phosphorylase
no
0.45
10
DZA65
_RS07395
alpha/beta hydrolase
no
0.45
11
DZA65
_RS16390
hypothetical protein
no
0.44
12
DZA65
_RS12810
YnbE family lipoprotein
no
0.43
13
DZA65
_RS11345
superoxide dismutase
no
0.42
14
DZA65
_RS11355
methylated-DNA--[protein]-cysteine S-methyltransferase
no
0.42
15
DZA65
_RS11065
L-arabinose isomerase
no
0.42
16
DZA65
_RS14540
SnoaL-like domain-containing protein
no
0.42
17
DZA65
_RS11500
hypothetical protein
no
0.40
18
DZA65
_RS12225
type III secretion protein
no
0.39
19
DZA65
_RS00025
MFS transporter
no
0.39
20
DZA65
_RS11470
ATP-dependent RNA helicase DbpA
no
0.39
Or look for
negative cofitness