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  • Top cofit genes for DZA65_RS18565 from Dickeya dianthicola ME23

    ABC transporter ATP-binding protein
    SEED: Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
    KEGG: putative spermidine/putrescine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS11200 Expansin-YoaJ no 0.51
    2 DZA65_RS14775 TolC family protein no 0.48
    3 DZA65_RS11630 YoaH family protein no 0.47
    4 DZA65_RS00680 M55 family metallopeptidase no 0.46
    5 DZA65_RS09385 glycoside hydrolase family 3 protein no 0.45
    6 DZA65_RS20015 protein nifT no 0.45
    7 DZA65_RS10295 hypothetical protein no 0.45
    8 DZA65_RS14850 carbamoyltransferase HypF no 0.45
    9 DZA65_RS01975 YhcH/YjgK/YiaL family protein no 0.44
    10 DZA65_RS00650 hypothetical protein no 0.44
    11 DZA65_RS04445 FAD-dependent oxidoreductase no 0.43
    12 DZA65_RS21700 LysR family transcriptional regulator no 0.43
    13 DZA65_RS12250 type III secretion system export apparatus protein SctT no 0.42
    14 DZA65_RS09185 nuclear transport factor 2 family protein no 0.42
    15 DZA65_RS04700 transposase no 0.42
    16 DZA65_RS06725 methyl-accepting chemotaxis protein no 0.42
    17 DZA65_RS10755 peptide-methionine (R)-S-oxide reductase MsrB no 0.42
    18 DZA65_RS16770 3-phenylpropionate MFS transporter no 0.41
    19 DZA65_RS01175 DUF1127 domain-containing protein no 0.41
    20 DZA65_RS20685 MFS transporter 0.21 0.41

    Or look for negative cofitness