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  • Top cofit genes for DZA65_RS18295 from Dickeya dianthicola ME23

    outer membrane protein assembly factor
    SEED: Uncharacterized protein YtfM precursor
    KEGG: outer membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS18290 translocation/assembly module TamB 0.99 0.62
    2 DZA65_RS22300 ribose ABC transporter substrate-binding protein RbsB 0.76 0.52
    3 DZA65_RS17280 endonuclease/exonuclease/phosphatase family protein 0.51 0.51
    4 DZA65_RS19920 nif-specific transcriptional activator NifA no 0.48
    5 DZA65_RS14775 TolC family protein no 0.45
    6 DZA65_RS02645 sugar ABC transporter permease no 0.44
    7 DZA65_RS11105 SgcJ/EcaC family oxidoreductase no 0.43
    8 DZA65_RS20165 miniconductance mechanosensitive channel MscM no 0.43
    9 DZA65_RS22295 ribokinase 0.94 0.43
    10 DZA65_RS07290 MFS transporter no 0.42
    11 DZA65_RS18145 GTP diphosphokinase 0.86 0.41
    12 DZA65_RS01670 DnaA initiator-associating protein DiaA 0.53 0.41
    13 DZA65_RS19030 nucleoside-specific channel-forming protein Tsx no 0.40
    14 DZA65_RS20685 MFS transporter no 0.40
    15 DZA65_RS13065 aconitate hydratase AcnA 0.88 0.40
    16 DZA65_RS06495 M15 family metallopeptidase 0.89 0.40
    17 DZA65_RS19620 deoxyribonuclease I 0.57 0.39
    18 DZA65_RS22290 substrate-binding domain-containing protein 0.95 0.39
    19 DZA65_RS19695 N-acetylmuramoyl-L-alanine amidase AmiB 0.64 0.39
    20 DZA65_RS19355 acyltransferase no 0.39

    Or look for negative cofitness