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  • Top cofit genes for DZA65_RS18290 from Dickeya dianthicola ME23

    translocation/assembly module TamB
    SEED: Uncharacterized protein YtfN
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS18295 outer membrane protein assembly factor 0.99 0.62
    2 DZA65_RS22300 ribose ABC transporter substrate-binding protein RbsB 0.79 0.50
    3 DZA65_RS18145 GTP diphosphokinase 0.76 0.50
    4 DZA65_RS19030 nucleoside-specific channel-forming protein Tsx 0.59 0.50
    5 DZA65_RS00575 YicC family protein 0.86 0.48
    6 DZA65_RS22775 hypothetical protein no 0.47
    7 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.47
    8 DZA65_RS22290 substrate-binding domain-containing protein 0.94 0.46
    9 DZA65_RS04780 hypothetical protein no 0.45
    10 DZA65_RS18315 DUF1107 domain-containing protein 0.66 0.44
    11 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.44
    12 DZA65_RS10725 YeaH/YhbH family protein 0.29 0.43
    13 DZA65_RS04545 helix-turn-helix transcriptional regulator 0.55 0.42
    14 DZA65_RS22295 ribokinase 0.95 0.42
    15 DZA65_RS12515 GAF domain-containing protein 0.50 0.41
    16 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF no 0.41
    17 DZA65_RS17740 murein L,D-transpeptidase no 0.40
    18 DZA65_RS22245 serine/threonine protein kinase no 0.40
    19 DZA65_RS04300 LuxR family transcriptional regulator no 0.39
    20 DZA65_RS09855 DUF2867 domain-containing protein no 0.39

    Or look for negative cofitness