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  • Top cofit genes for DZA65_RS18010 from Dickeya dianthicola ME23

    tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
    SEED: COG1720: Uncharacterized conserved protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07095 tyrosine-protein kinase Wzc 0.26 0.56
    2 DZA65_RS06275 transcriptional regulator RcsB 0.40 0.55
    3 DZA65_RS06270 two-component system sensor histidine kinase RcsC 0.43 0.51
    4 DZA65_RS18005 Rcs stress response system protein RcsF 0.47 0.49
    5 DZA65_RS07085 polysaccharide export protein 0.25 0.49
    6 DZA65_RS15075 DUF2635 domain-containing protein no 0.45
    7 DZA65_RS11600 ribonuclease D no 0.45
    8 DZA65_RS07455 IS3 family transposase no 0.45
    9 DZA65_RS14525 IS3 family transposase no 0.45
    10 DZA65_RS21450 DNA-binding transcriptional regulator OxyR 0.68 0.44
    11 DZA65_RS17720 xanthine phosphoribosyltransferase no 0.44
    12 DZA65_RS18790 peptidoglycan-binding protein no 0.43
    13 DZA65_RS13585 beta-N-acetylhexosaminidase 0.37 0.43
    14 DZA65_RS02765 ATPase AAA no 0.43
    15 DZA65_RS12315 aminotransferase class IV no 0.43
    16 DZA65_RS00450 hypothetical protein no 0.43
    17 DZA65_RS14250 poly(3-hydroxyalkanoate) depolymerase no 0.43
    18 DZA65_RS00395 VfmB protein no 0.43
    19 DZA65_RS11235 TolC family outer membrane protein 0.19 0.42
    20 DZA65_RS07100 undecaprenyl-phosphate galactose phosphotransferase WbaP 0.32 0.42

    Or look for negative cofitness