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  • Top cofit genes for DZA65_RS18005 from Dickeya dianthicola ME23

    Rcs stress response system protein RcsF
    SEED: Protein RcsF
    KEGG: RcsF protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS18010 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO 0.32 0.49
    2 DZA65_RS00050 ribonuclease Z no 0.49
    3 DZA65_RS07095 tyrosine-protein kinase Wzc 0.39 0.48
    4 DZA65_RS15365 DedA family protein 0.63 0.44
    5 DZA65_RS07100 undecaprenyl-phosphate galactose phosphotransferase WbaP 0.82 0.44
    6 DZA65_RS07085 polysaccharide export protein no 0.42
    7 DZA65_RS11445 fructotransferase 0.25 0.42
    8 DZA65_RS07335 IS481 family transposase no 0.41
    9 DZA65_RS11200 Expansin-YoaJ no 0.39
    10 DZA65_RS06350 SDR family oxidoreductase no 0.39
    11 DZA65_RS17465 cytochrome b561 no 0.38
    12 DZA65_RS17555 sensor histidine kinase 0.45 0.38
    13 DZA65_RS14565 DsbA family oxidoreductase no 0.36
    14 DZA65_RS06280 phosphotransferase RcsD 0.89 0.36
    15 DZA65_RS09350 helix-turn-helix domain-containing protein no 0.35
    16 DZA65_RS21670 serine hydrolase no 0.35
    17 DZA65_RS02765 ATPase AAA no 0.35
    18 DZA65_RS22245 serine/threonine protein kinase 0.73 0.34
    19 DZA65_RS09375 type II toxin-antitoxin system RelE/ParE family toxin no 0.34
    20 DZA65_RS11885 two-component system sensor histidine kinase PhoQ 0.64 0.34

    Or look for negative cofitness