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  • Top cofit genes for DZA65_RS17860 from Dickeya dianthicola ME23

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS09000 GTP 3',8-cyclase MoaA no 0.65
    2 DZA65_RS00675 isoaspartyl peptidase/L-asparaginase 0.30 0.58
    3 DZA65_RS20225 lysine-sensitive aspartokinase 3 no 0.57
    4 DZA65_RS03750 MFS transporter no 0.55
    5 DZA65_RS20105 acyl carrier protein no 0.55
    6 DZA65_RS15550 Fe(3+)-siderophore ABC transporter permease 0.26 0.53
    7 DZA65_RS02720 polysaccharide biosynthesis tyrosine autokinase no 0.52
    8 DZA65_RS14415 IS4 family transposase no 0.52
    9 DZA65_RS22475 glycosyltransferase family 2 protein no 0.51
    10 DZA65_RS18690 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 no 0.50
    11 DZA65_RS09865 hydroxylamine reductase no 0.50
    12 DZA65_RS02465 cell division protein ZapA no 0.49
    13 DZA65_RS06805 5-oxoprolinase subunit PxpB 0.37 0.49
    14 DZA65_RS11635 aminodeoxychorismate synthase component 1 0.52 0.49
    15 DZA65_RS09145 aspartate aminotransferase family protein 0.51 0.49
    16 DZA65_RS20600 ethanolamine permease no 0.49
    17 DZA65_RS16800 pectin acetylesterase no 0.49
    18 DZA65_RS10710 YebY family protein no 0.49
    19 DZA65_RS09020 molybdopterin synthase catalytic subunit MoaE 0.41 0.49
    20 DZA65_RS01360 50S ribosomal protein L11 methyltransferase no 0.48

    Or look for negative cofitness