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  • Top cofit genes for DZA65_RS17770 from Dickeya dianthicola ME23

    acireductone dioxygenase
    SEED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
    KEGG: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein no 0.46
    2 DZA65_RS16655 cytoskeleton protein RodZ no 0.44
    3 DZA65_RS09065 ABC transporter ATP-binding protein no 0.41
    4 DZA65_RS04965 hypothetical protein no 0.40
    5 DZA65_RS07705 type IV secretion protein Rhs no 0.40
    6 DZA65_RS20725 peptidylprolyl isomerase A no 0.40
    7 DZA65_RS04835 conjugal transfer protein TraR no 0.38
    8 DZA65_RS12655 phage major tail tube protein no 0.38
    9 DZA65_RS02400 HTH-type transcriptional activator RhaR no 0.38
    10 DZA65_RS15545 enterobactin transporter EntS no 0.37
    11 DZA65_RS00400 multidrug transporter no 0.37
    12 DZA65_RS12340 amidohydrolase 0.18 0.37
    13 DZA65_RS16220 Gfo/Idh/MocA family oxidoreductase 0.36 0.37
    14 DZA65_RS11920 type II toxin-antitoxin system RelE/ParE family toxin no 0.37
    15 DZA65_RS11620 ATP-dependent DNA helicase no 0.37
    16 DZA65_RS07260 ABC transporter substrate-binding protein no 0.36
    17 DZA65_RS19175 catabolite repressor/activator no 0.36
    18 DZA65_RS19240 hypothetical protein no 0.36
    19 DZA65_RS10125 triphosphoribosyl-dephospho-CoA synthase CitG no 0.35
    20 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA no 0.35

    Or look for negative cofitness