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  • Top cofit genes for DZA65_RS17745 from Dickeya dianthicola ME23

    class II glutamine amidotransferase
    SEED: Predicted glutamine amidotransferase
    KEGG: glutamine amidotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS19970 Fe-S cluster assembly protein NifU no 0.52
    2 DZA65_RS08295 Tat pathway signal sequence domain protein no 0.47
    3 DZA65_RS20645 OsmC family protein 0.59 0.40
    4 DZA65_RS20640 phosphoribulokinase 0.69 0.39
    5 DZA65_RS06045 PLP-dependent cysteine synthase family protein 0.37 0.37
    6 DZA65_RS10935 porin no 0.36
    7 DZA65_RS17545 carbon starvation protein A 0.39 0.36
    8 DZA65_RS18610 alpha/beta hydrolase no 0.36
    9 DZA65_RS11825 hypothetical protein no 0.34
    10 DZA65_RS21885 cellulose biosynthesis protein BcsO no 0.34
    11 DZA65_RS14225 LLM class flavin-dependent oxidoreductase no 0.33
    12 DZA65_RS18380 esterase no 0.33
    13 DZA65_RS03760 fructuronate reductase 0.26 0.33
    14 DZA65_RS09405 type II toxin-antitoxin system RelE/ParE family toxin no 0.33
    15 DZA65_RS22770 hypothetical protein no 0.33
    16 DZA65_RS00330 DNA-binding transcriptional regulator 0.38 0.33
    17 DZA65_RS01875 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.44 0.32
    18 DZA65_RS01205 HesA/MoeB/ThiF family protein no 0.32
    19 DZA65_RS13205 HNH nuclease family protein 0.40 0.32
    20 DZA65_RS08435 biotin-independent malonate decarboxylase subunit gamma 0.27 0.32

    Or look for negative cofitness