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  • Top cofit genes for DZA65_RS17705 from Dickeya dianthicola ME23

    diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS16865 sensor domain-containing diguanylate cyclase 0.45 0.48
    2 DZA65_RS02205 hypothetical protein no 0.45
    3 DZA65_RS04110 hypothetical protein no 0.39
    4 DZA65_RS10290 carbon-nitrogen hydrolase family protein no 0.38
    5 DZA65_RS03430 acetolactate synthase AlsS no 0.38
    6 DZA65_RS12795 lactate utilization protein C no 0.37
    7 DZA65_RS21520 cell division protein ZapB no 0.36
    8 DZA65_RS20040 pyruvate:ferredoxin (flavodoxin) oxidoreductase no 0.36
    9 DZA65_RS14395 EexN family lipoprotein no 0.34
    10 DZA65_RS00200 N-acetyltransferase no 0.33
    11 DZA65_RS12220 type III secretion system ATPase SctN no 0.33
    12 DZA65_RS06690 ROK family protein 0.80 0.33
    13 DZA65_RS12300 amino acid ABC transporter permease no 0.32
    14 DZA65_RS12245 type III secretion system export apparatus subunit SctS no 0.32
    15 DZA65_RS20330 DUF494 domain-containing protein 0.27 0.32
    16 DZA65_RS06080 glycoprotein/polysaccharide metabolism no 0.32
    17 DZA65_RS14390 TriD protein no 0.32
    18 DZA65_RS22680 TetR/AcrR family transcriptional regulator no 0.32
    19 DZA65_RS14585 protein disulfide-isomerase no 0.31
    20 DZA65_RS05270 NADP(H)-dependent aldo-keto reductase no 0.31

    Or look for negative cofitness