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  • Top cofit genes for DZA65_RS17575 from Dickeya dianthicola ME23

    ABC transporter permease
    SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15845 YkgJ family cysteine cluster protein no 0.51
    2 DZA65_RS19755 glycosyltransferase no 0.51
    3 DZA65_RS17730 beta-Ala-His dipeptidase no 0.50
    4 DZA65_RS09225 MFS transporter no 0.50
    5 DZA65_RS21510 1,4-dihydroxy-2-naphthoate polyprenyltransferase no 0.50
    6 DZA65_RS21265 thioredoxin TrxA 0.70 0.50
    7 DZA65_RS19750 hypothetical protein no 0.50
    8 DZA65_RS09810 DUF2593 family protein no 0.49
    9 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.48 0.48
    10 DZA65_RS03625 polysaccharide biosynthesis protein no 0.48
    11 DZA65_RS12450 respiratory nitrate reductase subunit gamma no 0.48
    12 DZA65_RS07110 dTDP-glucose 4,6-dehydratase no 0.48
    13 DZA65_RS16610 IMP dehydrogenase no 0.47
    14 DZA65_RS15285 phosphate acetyltransferase no 0.47
    15 DZA65_RS00665 TolC family protein no 0.47
    16 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG no 0.47
    17 DZA65_RS10710 YebY family protein no 0.47
    18 DZA65_RS04230 outer membrane protein assembly factor BamE no 0.47
    19 DZA65_RS19740 ABC transporter ATP-binding protein 0.58 0.46
    20 DZA65_RS11715 5-dehydro-4-deoxy-D-glucuronate isomerase no 0.46

    Or look for negative cofitness