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  • Top cofit genes for DZA65_RS17540 from Dickeya dianthicola ME23

    YbdD/YjiX family protein
    SEED: COG2879, Hypothetical small protein yjiX

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06805 5-oxoprolinase subunit PxpB 0.16 0.46
    2 DZA65_RS21235 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase no 0.42
    3 DZA65_RS07210 hypothetical protein no 0.42
    4 DZA65_RS03795 pyruvate:ferredoxin (flavodoxin) oxidoreductase no 0.41
    5 DZA65_RS06765 potassium-transporting ATPase subunit KdpC 0.54 0.41
    6 DZA65_RS01405 RNase E specificity factor CsrD no 0.41
    7 DZA65_RS22090 sugar ABC transporter permease no 0.40
    8 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ no 0.39
    9 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.32 0.39
    10 DZA65_RS05005 integrative conjugative element protein, RAQPRD family no 0.39
    11 DZA65_RS19180 acetolactate synthase small subunit 0.30 0.38
    12 DZA65_RS16595 hypothetical protein no 0.38
    13 DZA65_RS09000 GTP 3',8-cyclase MoaA 0.15 0.38
    14 DZA65_RS17875 glycine betaine/L-proline ABC transporter ATP-binding protein ProV 0.21 0.38
    15 DZA65_RS07115 glucose-1-phosphate thymidylyltransferase RfbA no 0.38
    16 DZA65_RS02355 1-aminocyclopropane-1-carboxylate deaminase no 0.38
    17 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.36 0.37
    18 DZA65_RS16050 exopolyphosphatase 0.43 0.37
    19 DZA65_RS20370 DUF1992 domain-containing protein no 0.37
    20 DZA65_RS09225 MFS transporter no 0.37

    Or look for negative cofitness