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  • Top cofit genes for DZA65_RS17145 from Dickeya dianthicola ME23

    polynucleotide adenylyltransferase PcnB
    SEED: Poly(A) polymerase (EC 2.7.7.19)
    KEGG: poly(A) polymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS02665 ROK family transcriptional regulator no 0.55
    2 DZA65_RS03260 lipoprotein NlpI 0.70 0.52
    3 DZA65_RS01555 outer membrane lipid asymmetry maintenance protein MlaD 0.19 0.50
    4 DZA65_RS08380 nucleoside hydrolase no 0.49
    5 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.77 0.49
    6 DZA65_RS22295 ribokinase 0.70 0.49
    7 DZA65_RS01560 phospholipid-binding protein MlaC 0.69 0.48
    8 DZA65_RS18020 RNA polymerase sigma factor RpoS 0.66 0.47
    9 DZA65_RS12505 carboxy terminal-processing peptidase 0.51 0.46
    10 DZA65_RS06785 YbfA family protein no 0.45
    11 DZA65_RS17995 methionine ABC transporter permease MetI 0.50 0.45
    12 DZA65_RS01545 phospholipid ABC transporter ATP-binding protein MlaF 0.69 0.45
    13 DZA65_RS10485 membrane protein no 0.45
    14 DZA65_RS22290 substrate-binding domain-containing protein 0.43 0.45
    15 DZA65_RS15515 phospholipid-binding lipoprotein MlaA 0.64 0.45
    16 DZA65_RS03020 signal transduction histidine-protein kinase/phosphatase UhpB no 0.44
    17 DZA65_RS07125 dTDP-4-dehydrorhamnose reductase no 0.44
    18 DZA65_RS17990 methionine ABC transporter ATP-binding protein MetN 0.53 0.44
    19 DZA65_RS02550 ABC transporter ATP-binding protein no 0.44
    20 DZA65_RS21755 cell division protein FtsX no 0.43

    Or look for negative cofitness