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Cofit
Top cofit genes for DZA65_RS16960 from
Dickeya dianthicola ME23
tRNA-Ala
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS18145
GTP diphosphokinase
no
0.64
2
DZA65
_RS12105
cupin domain-containing protein
no
0.62
3
DZA65
_RS17265
hydroxyacylglutathione hydrolase
no
0.57
4
DZA65
_RS17740
murein L,D-transpeptidase
no
0.57
5
DZA65
_RS09385
glycoside hydrolase family 3 protein
no
0.55
6
DZA65
_RS11060
rhamnogalacturonate lyase
no
0.54
7
DZA65
_RS03140
putative DNA-binding transcriptional regulator
no
0.53
8
DZA65
_RS21370
DUF413 domain-containing protein
no
0.53
9
DZA65
_RS21375
HTH-type transcriptional regulator HdfR
no
0.52
10
DZA65
_RS12950
phage shock protein operon transcriptional activator
no
0.52
11
DZA65
_RS03260
lipoprotein NlpI
no
0.52
12
DZA65
_RS20700
glutamate decarboxylase
no
0.51
13
DZA65
_RS20185
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
no
0.51
14
DZA65
_RS21040
threonine export protein RhtC
no
0.51
15
DZA65
_RS00035
oligopeptidase A
no
0.51
16
DZA65
_RS07455
IS3 family transposase
no
0.51
17
DZA65
_RS02705
undecaprenyl-phosphate glucose phosphotransferase
no
0.51
18
DZA65
_RS15215
hypothetical protein
no
0.50
19
DZA65
_RS21665
sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB
no
0.50
20
DZA65
_RS20190
fumarate reductase subunit FrdC
no
0.50
Or look for
negative cofitness