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  • Top cofit genes for DZA65_RS16865 from Dickeya dianthicola ME23

    sensor domain-containing diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS13105 transcriptional regulator SlyA 0.51 0.62
    2 DZA65_RS06690 ROK family protein no 0.58
    3 DZA65_RS09035 ABC transporter ATP-binding protein no 0.52
    4 DZA65_RS03295 N-acetyltransferase no 0.51
    5 DZA65_RS03290 SCP2 domain-containing protein no 0.49
    6 DZA65_RS09060 ABC transporter permease no 0.49
    7 DZA65_RS17705 diguanylate cyclase 0.45 0.48
    8 DZA65_RS15740 putative motility protein no 0.46
    9 DZA65_RS01620 ClpXP protease specificity-enhancing factor 0.61 0.46
    10 DZA65_RS22340 ATPase RavA no 0.44
    11 DZA65_RS11170 mannosyl-3-phosphoglycerate phosphatase-related protein no 0.44
    12 DZA65_RS19560 helix-turn-helix domain-containing protein no 0.43
    13 DZA65_RS04305 cytosine permease no 0.43
    14 DZA65_RS08625 GGDEF domain-containing protein 0.82 0.42
    15 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.41
    16 DZA65_RS16795 polysaccharide lyase no 0.41
    17 DZA65_RS05135 DUF1738 domain-containing protein no 0.41
    18 DZA65_RS13085 pyridoxamine 5'-phosphate oxidase no 0.40
    19 DZA65_RS08325 ATP-binding cassette domain-containing protein no 0.40
    20 DZA65_RS21130 uroporphyrinogen-III C-methyltransferase no 0.40

    Or look for negative cofitness