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  • Top cofit genes for DZA65_RS16660 from Dickeya dianthicola ME23

    type IV pilus biogenesis/stability protein PilW
    SEED: Type IV pilus biogenesis protein PilF
    KEGG: type IV pilus assembly protein PilF

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS03880 ABC transporter permease no 0.55
    2 DZA65_RS03760 fructuronate reductase no 0.52
    3 DZA65_RS08210 cyclic beta 1-2 glucan synthetase no 0.51
    4 DZA65_RS07285 galactonate dehydratase no 0.49
    5 DZA65_RS14445 hypothetical protein no 0.48
    6 DZA65_RS04690 NADP-dependent oxidoreductase no 0.46
    7 DZA65_RS21950 heat shock chaperone IbpB no 0.46
    8 DZA65_RS07855 hydrogenase 4 subunit B no 0.46
    9 DZA65_RS09315 ABC transporter permease no 0.46
    10 DZA65_RS19600 hypothetical protein no 0.46
    11 DZA65_RS04170 hypothetical protein no 0.46
    12 DZA65_RS13420 aminopeptidase N no 0.45
    13 DZA65_RS22770 hypothetical protein no 0.45
    14 DZA65_RS20180 fumarate reductase (quinol) flavoprotein subunit 0.59 0.45
    15 DZA65_RS12345 SDR family oxidoreductase no 0.45
    16 DZA65_RS21840 transposase no 0.45
    17 DZA65_RS10595 prolyl oligopeptidase family serine peptidase no 0.44
    18 DZA65_RS21325 DUF2461 domain-containing protein no 0.44
    19 DZA65_RS08915 glycosyltransferase no 0.44
    20 DZA65_RS18810 GPW/gp25 family protein no 0.44

    Or look for negative cofitness