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  • Top cofit genes for DZA65_RS16655 from Dickeya dianthicola ME23

    cytoskeleton protein RodZ
    SEED: FIG021952: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS19175 catabolite repressor/activator 0.75 0.57
    2 DZA65_RS01795 TonB system transport protein ExbD no 0.57
    3 DZA65_RS21270 ATP-dependent RNA helicase RhlB no 0.53
    4 DZA65_RS10905 TonB system transport protein TonB no 0.53
    5 DZA65_RS05885 transcriptional regulator NrdR 0.64 0.52
    6 DZA65_RS01790 tol-pal system-associated acyl-CoA thioesterase 0.38 0.52
    7 DZA65_RS20725 peptidylprolyl isomerase A 0.64 0.50
    8 DZA65_RS15540 Fe2+-enterobactin ABC transporter substrate-binding protein no 0.50
    9 DZA65_RS10110 citrate (pro-3S)-lyase subunit beta no 0.49
    10 DZA65_RS03635 sugar transferase no 0.48
    11 DZA65_RS01615 stringent starvation protein A 0.63 0.47
    12 DZA65_RS15580 enterochelin esterase 0.81 0.47
    13 DZA65_RS10360 hypothetical protein no 0.47
    14 DZA65_RS12020 ribonuclease toxin immunity protein CdiI no 0.47
    15 DZA65_RS21275 guanosine-5'-triphosphate,3'-diphosphate diphosphatase 0.52 0.47
    16 DZA65_RS15905 LysR family transcriptional regulator no 0.46
    17 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.47 0.46
    18 DZA65_RS05310 thymidylate synthase no 0.46
    19 DZA65_RS02525 4'-phosphopantetheinyl transferase superfamily protein no 0.46
    20 DZA65_RS11655 TerC family protein 0.34 0.45

    Or look for negative cofitness