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  • Top cofit genes for DZA65_RS16005 from Dickeya dianthicola ME23

    L-serine ammonia-lyase
    SEED: L-serine dehydratase (EC 4.3.1.17)
    KEGG: L-serine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS14790 TetR/AcrR family transcriptional regulator no 0.43
    2 DZA65_RS03975 ash family protein no 0.40
    3 DZA65_RS04135 hypothetical protein no 0.39
    4 DZA65_RS00070 GntR family transcriptional regulator no 0.39
    5 DZA65_RS06070 ammonium transporter AmtB 0.50 0.39
    6 DZA65_RS22680 TetR/AcrR family transcriptional regulator no 0.38
    7 DZA65_RS09550 elongation factor P-like protein YeiP no 0.38
    8 DZA65_RS07565 CcdB family protein no 0.38
    9 DZA65_RS08545 type VI secretion system contractile sheath large subunit no 0.38
    10 DZA65_RS21795 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter no 0.37
    11 DZA65_RS09930 replication-associated recombination protein A no 0.37
    12 DZA65_RS08575 type VI secretion system baseplate subunit TssK 0.23 0.37
    13 DZA65_RS17640 hypothetical protein no 0.37
    14 DZA65_RS22340 ATPase RavA no 0.37
    15 DZA65_RS01730 esterase YqiA 0.19 0.36
    16 DZA65_RS21660 sn-glycerol-3-phosphate ABC transporter permease UgpA no 0.35
    17 DZA65_RS15025 DUF2313 domain-containing protein no 0.35
    18 DZA65_RS14590 LysR family transcriptional regulator no 0.34
    19 DZA65_RS19050 protein transport protein HofC no 0.34
    20 DZA65_RS10575 MurR/RpiR family transcriptional regulator 0.51 0.33

    Or look for negative cofitness