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  • Top cofit genes for DZA65_RS15850 from Dickeya dianthicola ME23

    histidine utilization repressor
    SEED: Histidine utilization repressor
    KEGG: GntR family transcriptional regulator, histidine utilization repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04300 LuxR family transcriptional regulator no 0.62
    2 DZA65_RS13830 flagella biosynthesis regulatory protein FliZ 0.52 0.61
    3 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.60
    4 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.60
    5 DZA65_RS09740 alpha/beta hydrolase no 0.59
    6 DZA65_RS17325 polyphenol oxidase no 0.59
    7 DZA65_RS04305 cytosine permease no 0.58
    8 DZA65_RS13735 rhodanese-related sulfurtransferase 0.55 0.57
    9 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.56
    10 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.38 0.53
    11 DZA65_RS12950 phage shock protein operon transcriptional activator 0.34 0.51
    12 DZA65_RS14320 integrase arm-type DNA-binding domain-containing protein no 0.51
    13 DZA65_RS13440 porin no 0.51
    14 DZA65_RS14400 type IV secretion system protein no 0.51
    15 DZA65_RS14195 SDR family NAD(P)-dependent oxidoreductase no 0.51
    16 DZA65_RS12515 GAF domain-containing protein no 0.51
    17 DZA65_RS14230 KR domain-containing protein no 0.51
    18 DZA65_RS04135 hypothetical protein no 0.50
    19 DZA65_RS13545 arylamine N-acetyltransferase no 0.50
    20 DZA65_RS00580 LysR family transcriptional regulator no 0.49

    Or look for negative cofitness