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  • Top cofit genes for DZA65_RS15705 from Dickeya dianthicola ME23

    alanine transaminase
    SEED: Uncharacterized PLP-dependent aminotransferase YfdZ
    KEGG: alanine-synthesizing transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00080 MBOAT family protein no 0.54
    2 DZA65_RS03825 DinI family protein no 0.48
    3 DZA65_RS17725 hypothetical protein no 0.47
    4 DZA65_RS20010 protein nifY no 0.47
    5 DZA65_RS10645 histidine kinase 0.92 0.45
    6 DZA65_RS09965 LysR family transcriptional regulator 0.54 0.44
    7 DZA65_RS06745 alpha-D-glucose phosphate-specific phosphoglucomutase 0.42 0.43
    8 DZA65_RS22780 hypothetical protein no 0.42
    9 DZA65_RS15090 hypothetical protein no 0.42
    10 DZA65_RS16375 hypothetical protein no 0.42
    11 DZA65_RS04280 GNAT family acetyltransferase no 0.42
    12 DZA65_RS02315 ABC transporter substrate-binding protein no 0.41
    13 DZA65_RS13055 ABC transporter substrate-binding protein no 0.41
    14 DZA65_RS15430 type 1 glutamine amidotransferase domain-containing protein no 0.40
    15 DZA65_RS09180 DsbA family protein no 0.39
    16 DZA65_RS05065 TIGR03757 family integrating conjugative element protein 0.28 0.39
    17 DZA65_RS12260 peptide antibiotic transporter SbmA 0.51 0.39
    18 DZA65_RS02135 DNA-binding transcriptional regulator no 0.38
    19 DZA65_RS13180 alkene reductase no 0.38
    20 DZA65_RS11470 ATP-dependent RNA helicase DbpA 0.28 0.37

    Or look for negative cofitness