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  • Top cofit genes for DZA65_RS15695 from Dickeya dianthicola ME23

    type II secretion system assembly factor GspB
    SEED: General secretion pathway protein B
    KEGG: general secretion pathway protein B

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS10965 anthranilate synthase component 1 no 0.52
    2 DZA65_RS10940 tryptophan synthase subunit alpha no 0.51
    3 DZA65_RS15010 hypothetical protein no 0.50
    4 DZA65_RS16715 Fe-S cluster assembly scaffold IscU no 0.48
    5 DZA65_RS12825 DUF333 domain-containing protein no 0.48
    6 DZA65_RS12455 nitrate reductase molybdenum cofactor assembly chaperone 0.41 0.47
    7 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD no 0.47
    8 DZA65_RS09000 GTP 3',8-cyclase MoaA no 0.47
    9 DZA65_RS00360 MarR family transcriptional regulator no 0.46
    10 DZA65_RS07105 glycosyltransferase family 2 protein no 0.46
    11 DZA65_RS18175 glucarate dehydratase no 0.46
    12 DZA65_RS10945 tryptophan synthase subunit beta no 0.46
    13 DZA65_RS10955 anthranilate phosphoribosyltransferase no 0.46
    14 DZA65_RS06300 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase no 0.45
    15 DZA65_RS19750 hypothetical protein no 0.45
    16 DZA65_RS10340 ribosomal protein S5-alanine N-acetyltransferase no 0.45
    17 DZA65_RS06805 5-oxoprolinase subunit PxpB no 0.45
    18 DZA65_RS02720 polysaccharide biosynthesis tyrosine autokinase no 0.45
    19 DZA65_RS05155 DUF2786 domain-containing protein no 0.44
    20 DZA65_RS19755 glycosyltransferase no 0.44

    Or look for negative cofitness